Home - About - Screenshots - Tutorial - FAQ - Mailing list - What's new

Criteria was:
S. cerevisiae / Lyons_zap1p / DY1457 (wild type) 3 mM vs. 10 uM zinc y12-121 down 3 folds -->36 orfs

36 ORF selected after filtering.

Hint: you can post this ORF list to external databases using links provided at the bottom of the page

Warning: pg_exec() [function.pg-exec]: Query failed: ERREUR: entrée manquante de la clause FROM pour la table « organisms » at character 213 in /httpd/htdocs/Transcriptome/ymgv/signature_search_exp.php on line 372
ORFLinks
YAL058C-AyMGV CYGD SGD YPD YAL058C-A / YAL056C-A (YAL058C-A)
No description in GO (SGD/2003-07-31) [Help on GO]
GO:0008372 (C) - cellular_component unknown (ND)
GO:0005554 (F) - molecular_function unknown (ND)
GO:0000004 (P) - biological_process unknown (ND)
Orthologs [Help on orthologs]
Lyons_zap1p
YBR003WyMGV CYGD SGD YPD YBR003W / COQ1 (YBR003W)
Description: hexaprenyl pyrophosphate synthetase (SGD/2003-07-31) [Help on GO]
GO:0005739 (C) - mitochondrion (IMP)
GO:0000010 (F) - trans-hexaprenyltranstransferase (IMP)
GO:0006743 (P) - ubiquinone metabolism (IMP)
Orthologs [Help on orthologs]
Lyons_zap1p
YBR050CyMGV CYGD SGD YPD YBR050C / REG2 (YBR050C)
Description: Glc7p regulatory subunit (SGD/2003-07-31) [Help on GO]
GO:0000164 (C) - protein phosphatase type 1 complex (IPI)
GO:0000163 (F) - protein phosphatase type 1 (IGI)
GO:0000163 (F) - protein phosphatase type 1 (IPI)
GO:0000122 (P) - negative regulation of transcription from Pol II promoter (IGI)
GO:0008151 (P) - cell growth and/or maintenance (IMP)
Orthologs [Help on orthologs]
Lyons_zap1p
YBR182CyMGV CYGD SGD YPD YBR182C / SMP1 (YBR182C)
No description in GO (SGD/2003-07-31) [Help on GO]
GO:0005634 (C) - nucleus (IDA)
GO:0005737 (C) - cytoplasm (IDA)
GO:0003700 (F) - transcription factor (IPI)
GO:0003700 (F) - transcription factor (ISS)
GO:0008301 (F) - DNA bending (IDA)
GO:0045944 (P) - positive regulation of transcription from Pol II promoter (IGI)
GO:0045944 (P) - positive regulation of transcription from Pol II promoter (IMP)
GO:0045944 (P) - positive regulation of transcription from Pol II promoter (ISS)
Orthologs [Help on orthologs]
Lyons_zap1p
YBR213WyMGV CYGD SGD YPD YBR213W / MET8 (YBR213W)
No description in GO (SGD/2003-07-31) [Help on GO]
GO:0008372 (C) - cellular_component unknown (ND)
GO:0004325 (F) - ferrochelatase (IDA)
GO:0009006 (F) - siroheme synthase (IDA)
GO:0000103 (P) - sulfate assimilation (IMP)
GO:0019354 (P) - siroheme biosynthesis (IMP)
Orthologs [Help on orthologs]
Lyons_zap1p
YDL207WyMGV CYGD SGD YPD YDL207W / GLE1 (YDL207W|BRR3|RSS1)
Description: nuclear pore complex subunit, nuclear-export-signal (NES)-containing protein (SGD/2003-07-31) [Help on GO]
GO:0005643 (C) - nuclear pore (TAS)
GO:0005554 (F) - molecular_function unknown (ND)
GO:0016973 (P) - poly(A)+ mRNA-nucleus export (IMP)
Orthologs [Help on orthologs]
Lyons_zap1p
YDL211CyMGV CYGD SGD YPD YDL211C / YDL211C
No description in GO (SGD/2003-07-31) [Help on GO]
GO:0008372 (C) - cellular_component unknown (ND)
GO:0005554 (F) - molecular_function unknown (ND)
GO:0000004 (P) - biological_process unknown (ND)
Orthologs [Help on orthologs]
Lyons_zap1p
YDL216CyMGV CYGD SGD YPD YDL216C / RRI1 (YDL216C|JAB1|CSN5)
Description: COP9 signalosome (CSN) subunit (SGD/2003-07-31) [Help on GO]
GO:0008180 (C) - signalosome complex (IDA)
GO:0008180 (C) - signalosome complex (TAS)
GO:0004222 (F) - metalloendopeptidase (IMP)
GO:0000338 (P) - protein deneddylation (IMP)
GO:0000338 (P) - protein deneddylation (IMP)
GO:0000338 (P) - protein deneddylation (IMP)
GO:0000754 (P) - adaptation to pheromone during conjugation with cellular fusion (IMP)
Orthologs [Help on orthologs]
Lyons_zap1p
YDL217CyMGV CYGD SGD YPD YDL217C / TIM22 (YDL217C)
No description in GO (SGD/2003-07-31) [Help on GO]
GO:0042721 (C) - (IDA)
GO:0008565 (F) - protein transporter (TAS)
GO:0006628 (P) - mitochondrial translocation (TAS)
Orthologs [Help on orthologs]
Lyons_zap1p
YDR139CyMGV CYGD SGD YPD YDR139C / RUB1 (YDR139C)
Description: ubiquitin-like protein (SGD/2003-07-31) [Help on GO]
GO:0008372 (C) - cellular_component unknown (ND)
GO:0008638 (F) - protein tagging (IDA)
GO:0019942 (P) - RUB1-dependent protein catabolism (IDA)
Orthologs [Help on orthologs]
Lyons_zap1p
YDR149CyMGV CYGD SGD YPD YDR149C / YDR149C
No description in GO (SGD/2003-07-31) [Help on GO]
GO:0008372 (C) - cellular_component unknown (ND)
GO:0005554 (F) - molecular_function unknown (ND)
GO:0000004 (P) - biological_process unknown (ND)
Orthologs [Help on orthologs]
Lyons_zap1p
YDR185CyMGV CYGD SGD YPD YDR185C / YDR185C
No description in GO (SGD/2003-07-31) [Help on GO]
GO:0008372 (C) - cellular_component unknown (ND)
GO:0005554 (F) - molecular_function unknown (ND)
GO:0000004 (P) - biological_process unknown (ND)
Orthologs [Help on orthologs]
Lyons_zap1p
YDR430CyMGV CYGD SGD YPD YDR430C / CYM1 (YDR430C)
Description: Metalloprotease (SGD/2003-07-31) [Help on GO]
GO:0008372 (C) - cellular_component unknown (ND)
GO:0005554 (F) - molecular_function unknown (ND)
GO:0000004 (P) - biological_process unknown (ND)
Orthologs [Help on orthologs]
Lyons_zap1p
YDR434WyMGV CYGD SGD YPD YDR434W / GPI17 (YDR434W)
Description: GPI transamidase component, human PIG-S homologue (SGD/2003-07-31) [Help on GO]
GO:0030176 (C) - endoplasmic reticulum membrane, intrinsic protein (ISS)
GO:0030176 (C) - endoplasmic reticulum membrane, intrinsic protein (IMP)
GO:0003923 (F) - GPI-anchor transamidase (ISS)
GO:0003923 (F) - GPI-anchor transamidase (IMP)
GO:0016255 (P) - attachment of GPI anchor to protein (ISS)
GO:0016255 (P) - attachment of GPI anchor to protein (IMP)
Orthologs [Help on orthologs]
Lyons_zap1p
YER066C-AyMGV CYGD SGD YPD YER066C-A / YER066C-A
No description in GO (SGD/2003-07-31) [Help on GO]
GO:0008372 (C) - cellular_component unknown (ND)
GO:0005554 (F) - molecular_function unknown (ND)
GO:0000004 (P) - biological_process unknown (ND)
Orthologs [Help on orthologs]
Lyons_zap1p
YGL089CyMGV CYGD SGD YPD YGL089C / MF(ALPHA)2 (YGL089C)
Description: alpha mating factor (SGD/2003-07-31) [Help on GO]
GO:0005576 (C) - extracellular (NAS)
GO:0005186 (F) - pheromone (NAS)
GO:0005186 (F) - pheromone (NAS)
GO:0000749 (P) - response to pheromone during conjugation with cellular fusion (NAS)
Orthologs [Help on orthologs]
Lyons_zap1p
YGL262WyMGV CYGD SGD YPD YGL262W / YGL262W
No description in GO (SGD/2003-07-31) [Help on GO]
GO:0008372 (C) - cellular_component unknown (ND)
GO:0005554 (F) - molecular_function unknown (ND)
GO:0000004 (P) - biological_process unknown (ND)
Orthologs [Help on orthologs]
Lyons_zap1p
YGL263WyMGV CYGD SGD YPD YGL263W / COS12 (YGL263W)
No description in GO (SGD/2003-07-31) [Help on GO]
GO:0008372 (C) - cellular_component unknown (ND)
GO:0005554 (F) - molecular_function unknown (ND)
GO:0000004 (P) - biological_process unknown (ND)
Orthologs [Help on orthologs]
Lyons_zap1p
YGR291CyMGV CYGD SGD YPD YGR291C / YGR291C
No description in GO (SGD/2003-07-31) [Help on GO]
GO:0008372 (C) - cellular_component unknown (ND)
GO:0005554 (F) - molecular_function unknown (ND)
GO:0000004 (P) - biological_process unknown (ND)
Orthologs [Help on orthologs]
Lyons_zap1p
YHR001W-AyMGV CYGD SGD YPD YHR001W-A / QCR10 (YHR001W-A)
Description: ubiqunol-cytochrome c oxidoreductase complex 8.5 kDa subunit (SGD/2003-07-31) [Help on GO]
GO:0005750 (C) - respiratory chain complex III (sensu Eukarya) (IDA)
GO:0008121 (F) - ubiquinol-cytochrome c reductase (IDA)
GO:0006122 (P) - oxidative phosphorylation, ubiquinone to cytochrome c (IMP)
GO:0009060 (P) - aerobic respiration (IGI)
Orthologs [Help on orthologs]
Lyons_zap1p
YIR013CyMGV CYGD SGD YPD YIR013C / GAT4 (YIR013C)
Description: very short and so far mRNA can't be detected (SGD/2003-07-31) [Help on GO]
GO:0005634 (C) - nucleus (ISS)
GO:0003700 (F) - transcription factor (ISS)
GO:0006350 (P) - transcription (ISS)
Orthologs [Help on orthologs]
Lyons_zap1p
YJL012CyMGV CYGD SGD YPD YJL012C / VTC4 (YJL012C|PHM3)
Description: polyphosphate synthetase (putative) (SGD/2003-07-31) [Help on GO]
GO:0005774 (C) - vacuolar membrane (IDA)
GO:0005554 (F) - molecular_function unknown (ND)
GO:0042144 (P) - vacuole fusion (non-autophagic) (IMP)
Orthologs [Help on orthologs]
Lyons_zap1p
YJL150WyMGV CYGD SGD YPD YJL150W / YJL150W
No description in GO (SGD/2003-07-31) [Help on GO]
GO:0008372 (C) - cellular_component unknown (ND)
GO:0005554 (F) - molecular_function unknown (ND)
GO:0000004 (P) - biological_process unknown (ND)
Orthologs [Help on orthologs]
Lyons_zap1p
YJR004CyMGV CYGD SGD YPD YJR004C / SAG1 (YJR004C|AG(ALPHA)1)
Description: alpha-agglutinin (SGD/2003-07-31) [Help on GO]
GO:0009277 (C) - cell wall (sensu Fungi) (IDA)
GO:0004895 (F) - cell adhesion receptor (IMP)
GO:0004895 (F) - cell adhesion receptor (IMP)
GO:0000752 (P) - agglutination during conjugation with cellular fusion (IMP)
GO:0000752 (P) - agglutination during conjugation with cellular fusion (IMP)
Orthologs [Help on orthologs]
Lyons_zap1p
YKL081WyMGV CYGD SGD YPD YKL081W / TEF4 (YKL081W|EFC1)
Description: translation elongation factor EF-1gamma (SGD/2003-07-31) [Help on GO]
GO:0005840 (C) - ribosome (TAS)
GO:0003746 (F) - translation elongation factor (TAS)
GO:0006414 (P) - translational elongation (TAS)
Orthologs [Help on orthologs]
Lyons_zap1p
YLL030CyMGV CYGD SGD YPD YLL030C / YLL030C
No description in GO (SGD/2003-07-31) [Help on GO]
GO:0008372 (C) - cellular_component unknown (ND)
GO:0005554 (F) - molecular_function unknown (ND)
GO:0000004 (P) - biological_process unknown (ND)
Orthologs [Help on orthologs]
Lyons_zap1p
YLR184WyMGV CYGD SGD YPD YLR184W / YLR184W
No description in GO (SGD/2003-07-31) [Help on GO]
GO:0008372 (C) - cellular_component unknown (ND)
GO:0005554 (F) - molecular_function unknown (ND)
GO:0000004 (P) - biological_process unknown (ND)
Orthologs [Help on orthologs]
Lyons_zap1p
YLR235CyMGV CYGD SGD YPD YLR235C / YLR235C
No description in GO (SGD/2003-07-31) [Help on GO]
GO:0008372 (C) - cellular_component unknown (ND)
GO:0005554 (F) - molecular_function unknown (ND)
GO:0000004 (P) - biological_process unknown (ND)
Orthologs [Help on orthologs]
Lyons_zap1p
YML083CyMGV CYGD SGD YPD YML083C / YML083C
No description in GO (SGD/2003-07-31) [Help on GO]
GO:0008372 (C) - cellular_component unknown (ND)
GO:0005554 (F) - molecular_function unknown (ND)
GO:0000004 (P) - biological_process unknown (ND)
Orthologs [Help on orthologs]
Lyons_zap1p
YMR117CyMGV CYGD SGD YPD YMR117C / SPC24 (YMR117C)
Description: spindle pole component (SGD/2003-07-31) [Help on GO]
GO:0000778 (C) - (IMP)
GO:0000778 (C) - (IPI)
GO:0000780 (C) - (IGI)
GO:0000780 (C) - (IPI)
GO:0005200 (F) - structural constituent of cytoskeleton (IPI)
GO:0007020 (P) - microtubule nucleation (IPI)
GO:0007059 (P) - chromosome segregation (IMP)
GO:0007059 (P) - chromosome segregation (IGI)
Orthologs [Help on orthologs]
Lyons_zap1p
YNR003CyMGV CYGD SGD YPD YNR003C / RPC34 (YNR003C)
Description: RNA polymerase III (C) 34 kDa subunit (SGD/2003-07-31) [Help on GO]
GO:0005634 (C) - nucleus (IDA)
GO:0005666 (C) - DNA-directed RNA polymerase III complex (TAS)
GO:0005737 (C) - cytoplasm (IDA)
GO:0003899 (F) - DNA-directed RNA polymerase (TAS)
GO:0006383 (P) - transcription from Pol III promoter (TAS)
Orthologs [Help on orthologs]
Lyons_zap1p
YOL085CyMGV CYGD SGD YPD YOL085C / YOL085C
No description in GO (SGD/2003-07-31) [Help on GO]
GO:0008372 (C) - cellular_component unknown (ND)
GO:0005554 (F) - molecular_function unknown (ND)
GO:0000004 (P) - biological_process unknown (ND)
Orthologs [Help on orthologs]
Lyons_zap1p
YOR304C-AyMGV CYGD SGD YPD YOR304C-A / YOR304C-A
No description in GO (SGD/2003-07-31) [Help on GO]
GO:0008372 (C) - cellular_component unknown (ND)
GO:0005554 (F) - molecular_function unknown (ND)
GO:0000004 (P) - biological_process unknown (ND)
Orthologs [Help on orthologs]
Lyons_zap1p
YOR313CyMGV CYGD SGD YPD YOR313C / SPS4 (YOR313C)
No description in GO (SGD/2003-07-31) [Help on GO]
GO:0008372 (C) - cellular_component unknown (ND)
GO:0005554 (F) - molecular_function unknown (ND)
GO:0006259 (P) - DNA metabolism (IGI)
GO:0007126 (P) - meiosis (IEP)
GO:0007151 (P) - sporulation (sensu Saccharomyces) (IEP)
Orthologs [Help on orthologs]
Lyons_zap1p
YPL021WyMGV CYGD SGD YPD YPL021W / ECM23 (YPL021W|SRD2)
No description in GO (SGD/2003-07-31) [Help on GO]
GO:0008372 (C) - cellular_component unknown (ND)
GO:0005554 (F) - molecular_function unknown (ND)
GO:0007047 (P) - cell wall organization and biogenesis (IMP)
GO:0007124 (P) - pseudohyphal growth (IMP)
Orthologs [Help on orthologs]
Lyons_zap1p
YPL130WyMGV CYGD SGD YPD YPL130W / SPO19 (YPL130W)
Description: meiosis-specific GPI-protein (SGD/2003-07-31) [Help on GO]
GO:0009277 (C) - cell wall (sensu Fungi) (IDA)
GO:0005554 (F) - molecular_function unknown (ND)
GO:0007126 (P) - meiosis (IEP)
Orthologs [Help on orthologs]
Lyons_zap1p
Post whole Saccharomyces_cerevisiae ORF list to:
View transcriptional profile alignment using yMGV (access 2).
Metabolic pathway analysis using KEGG.
Genomic datasets using Fun Spec
Promoter analysis using RSA tools.


SGD GO mapping: Process
SGD GO mapping: Function
SGD GO mapping: Component

home
this script was last updated: 08/09/2003